Grew • Command Line Interface

The command used to run Grew is: grew <subcommand> [<args>]

The 5 main subcommands are:

• 🔗 transform: application of a rewriting system to a set of graphs
• 🔗grep: search for a request in a corpus
• 🔗 count: compute stats of a set of requests in a set of corpora
• 🔗 compile: compile a set of corpora
• 🔗clean: clean a set of corpora

Other subcommands:

• version: Print version numbers of the Grew Ocaml library and of the Grew tool
• help: Print general help
• help <subcommand>: Print help for the given subcommand

There are two modes of input data: Mono corpus or Multi corpora. See here for more details about input formats.

The table below shows what are the accepted input modes for the main subcommands.

	transform	grep	count	compile	clean
Mono	✅	✅	✅ (🆕 in 1.10)	❌	❌
Multi	❌	✅ (🆕 in 1.10)	✅	✅	✅

The table below shows what are the ouptut mode modes for the 3 main subcommands (compile and clean does not have any output).

	CLI arg	transform	grep	count
CoNLL-U	∅	✅ (default)	❌	❌
JSON	-json	✅	✅ (default)	✅ (default)
CoNLL-X	-cupt / -semcor / -columns …	✅	❌	❌
DOT	-dot	✅	❌	❌
multi JSON	-multi_json	✅	❌	❌
TSV	-tsv	❌	❌	✅ (in some cases)

---

Transform

In this mode, Grew apply a Graph Rewriting System to a graph or a set of graphs.

The full command for this mode:

grew transform [<args>]

All arguments are optional:

• -grs <grs_file>: the main file which describes the Graph Rewriting System. If no GRS is given, the empty GRS is loaded: strat main {Seq ()}
• -i <input_file>: describes the input data (CoNLL file of gr file). If no input file is given, Grew reads from stdin
• -o <output_file>: is the name of the output file (CoNLL file). If no output file is given, Grew writes to stdout
• -strat <name>: the strategy used in transformation (default value: main)
• -safe_commands: flag. It makes rewriting process fail in case of ineffective command
• -config: See here

---

Grep

This mode corresponds to the command line version of the Grew-match tool. The clustering is also available 🔗 in the grep mode.

Without clustering

The command is:

grew grep -request <request_file> -i <input>

where:

• <request_file> is a file which describes a request
• <input> describes the data on which the search is done
  • one corpus (Mono mode); in this case, the optionnal -config parameter (see here) can also be used
  • a set of corpora (Multi mode)

The output is given in JSON format.

Example with Mono input

With the following files:

• The corpus UD_French-PUD version 2.12: fr_pud-ud-test.conllu🔗
• A request file with the code below: dislocated.req🔗

pattern { e: M -[dislocated]-> N }

NB: the fact the edge from M to N is given an identifier e will give the information about this edge in the output (see below).

The command:

grew grep -request dislocated.req -i fr_pud-ud-test.conllu

produces the following JSON output:

[
  {
    "sent_id": "n01121051",
    "matching": {
      "nodes": { "N": "11", "M": "2" },
      "edges": {
        "e": { "source": "2", "label": "dislocated", "target": "11" }
      }
    }
  },
  {
    "sent_id": "n01086031",
    "matching": {
      "nodes": { "N": "5", "M": "1" },
      "edges": {
        "e": { "source": "1", "label": "dislocated", "target": "5" }
      }
    }
  },
  {
    "sent_id": "n01001011",
    "matching": {
      "nodes": { "N": "20", "M": "29" },
      "edges": {
        "e": { "source": "29", "label": "dislocated", "target": "20" }
      }
    }
  }
]

This means that the request described in the file dislocated.req was found three times in the corpus, each item gives the sentence identifier and the position of the nodes and the edges matched by the request.

Note that two other options exist:

• -html: produces a new html field in each JSON item with the sentence where words impacted by the request are in a special HTML span with class highlight
• -dep_dir <directory>: produces a new file in the folder directory with the representation of the sentence with highlighted part (as in Grew-match tool) and a new field in each JSON item with the filename; the output is in dep format (usable with Dep2pict).

Example with Multi input

With the Mutli mode data described in the example file en_fr_zh.json 🔗 (which must be compiled with grew compile -i en_fr_zh.json)

{ "corpora": [
  { "id": "UD_English-PUD",
    "directory": "_build",
    "files": ["en_pud-ud-test.conllu"]
  },
  { "id": "UD_French-PUD",
    "directory": "_build",
    "files": ["fr_pud-ud-test.conllu"]
  },
  { "id": "UD_Chinese-PUD",
    "directory": "_build",
    "files": ["zh_pud-ud-test.conllu"]
  } ]
}

The command:

grew grep -request dislocated.req -i en_fr_zh.json

produces the following JSON output:

{
  "UD_French-PUD": [
    {
      "sent_id": "n01121051",
      "matching": {
        "nodes": { "N": "11", "M": "2" },
        "edges": {
          "e": { "source": "2", "label": "dislocated", "target": "11" }
        }
      }
    },
    {
      "sent_id": "n01086031",
      "matching": {
        "nodes": { "N": "5", "M": "1" },
        "edges": {
          "e": { "source": "1", "label": "dislocated", "target": "5" }
        }
      }
    },
    {
      "sent_id": "n01001011",
      "matching": {
        "nodes": { "N": "20", "M": "29" },
        "edges": {
          "e": { "source": "29", "label": "dislocated", "target": "20" }
        }
      }
    }
  ],
  "UD_English-PUD": [
    {
      "sent_id": "n01029007",
      "matching": {
        "nodes": { "N": "3", "M": "6" },
        "edges": {
          "e": { "source": "6", "label": "dislocated", "target": "3" }
        }
      }
    },
    {
      "sent_id": "n01002058",
      "matching": {
        "nodes": { "N": "4", "M": "17" },
        "edges": {
          "e": { "source": "17", "label": "dislocated", "target": "4" }
        }
      }
    }
  ],
  "UD_Chinese-PUD": [
    {
      "sent_id": "w04010029",
      "matching": {
        "nodes": { "N": "25", "M": "18" },
        "edges": {
          "e": { "source": "18", "label": "dislocated", "target": "25" }
        }
      }
    },
    {
      "sent_id": "n05002017",
      "matching": {
        "nodes": { "N": "4", "M": "1" },
        "edges": {
          "e": { "source": "1", "label": "dislocated", "target": "4" }
        }
      }
    },
    {
      "sent_id": "w01116100",
      "matching": {
        "nodes": { "N": "14", "M": "11" },
        "edges": {
          "e": { "source": "11", "label": "dislocated", "target": "14" }
        }
      }
    },
    {
      "sent_id": "w01107013",
      "matching": {
        "nodes": { "N": "16", "M": "9" },
        "edges": {
          "e": { "source": "9", "label": "dislocated", "target": "16" }
        }
      }
    },
    {
      "sent_id": "n01070017",
      "matching": {
        "nodes": { "N": "8", "M": "6" },
        "edges": {
          "e": { "source": "6", "label": "dislocated", "target": "8" }
        }
      }
    }
  ]
}

With clustering

In both modes Mono and Multi, if the command line additionally contains one or more arguments (-key … or -whether …), the set of occurrences is recursively clusterised following the given clustering items.

See the clustering documentation page for details about the different existing clustering items.

Examples

With the same files as in the without clustering example above.

With -key, we can cluster the results according to the upos of the node N (the dependent).

grew grep -request dislocated.req -key N.upos -i fr_pud-ud-test.conllu

{
  "PRON": [
    {
      "sent_id": "n01086031",
      "matching": {
        "nodes": { "N": "5", "M": "1" },
        "edges": {
          "e": { "source": "1", "label": "dislocated", "target": "5" }
        }
      }
    }
  ],
  "NOUN": [
    {
      "sent_id": "n01121051",
      "matching": {
        "nodes": { "N": "11", "M": "2" },
        "edges": {
          "e": { "source": "2", "label": "dislocated", "target": "11" }
        }
      }
    },
    {
      "sent_id": "n01001011",
      "matching": {
        "nodes": { "N": "20", "M": "29" },
        "edges": {
          "e": { "source": "29", "label": "dislocated", "target": "20" }
        }
      }
    }
  ]
}

With -whether, we can cluster the results according to the fact that the relation left-headed. We observe that in two cases, the governor M is before N.

grew grep -request dislocated.req -whether "M << N" -i fr_pud-ud-test.conllu

{
  "Yes": [
    {
      "sent_id": "n01121051",
      "matching": {
        "nodes": { "N": "11", "M": "2" },
        "edges": {
          "e": { "source": "2", "label": "dislocated", "target": "11" }
        }
      }
    },
    {
      "sent_id": "n01086031",
      "matching": {
        "nodes": { "N": "5", "M": "1" },
        "edges": {
          "e": { "source": "1", "label": "dislocated", "target": "5" }
        }
      }
    }
  ],
  "No": [
    {
      "sent_id": "n01001011",
      "matching": {
        "nodes": { "N": "20", "M": "29" },
        "edges": {
          "e": { "source": "29", "label": "dislocated", "target": "20" }
        }
      }
    }
  ]
}

Finally, several clustering can be applied successively. For instance

grew grep -request dislocated.req -key N.upos -whether "M << N" -i fr_pud-ud-test.conllu

{
  "PRON": {
    "Yes": [
      {
        "sent_id": "n01086031",
        "matching": {
          "nodes": { "N": "5", "M": "1" },
          "edges": {
            "e": { "source": "1", "label": "dislocated", "target": "5" }
          }
        }
      }
    ]
  },
  "NOUN": {
    "Yes": [
      {
        "sent_id": "n01121051",
        "matching": {
          "nodes": { "N": "11", "M": "2" },
          "edges": {
            "e": { "source": "2", "label": "dislocated", "target": "11" }
          }
        }
      }
    ],
    "No": [
      {
        "sent_id": "n01001011",
        "matching": {
          "nodes": { "N": "20", "M": "29" },
          "edges": {
            "e": { "source": "29", "label": "dislocated", "target": "20" }
          }
        }
      }
    ]
  }
}

Remarks:

• any longer sequence of -key … or -whether … can be used
• the relative order of clutering items is relevant (try grew grep -request dislocated.req -whether "M << N" -key N.upos -i fr_pud-ud-test.conllu)
• it is possible to combine Multi mode and clustering: grew grep -request dislocated.req -key N.upos -whether "M << N" -i en_fr_zh.json

---

Count

This mode computes corpus statistics based on Grew-match style requests.

The input data are:

• one (Mono mode) or several (Multi mode) corpora
• one or several requests
• any number of clustering item (either key of whether)

By default, it returns a JSON describing several embedded dictionaries, counting in each corpus, each request clustered following clustering items.

If the output dimension is 2, the statistics can be printed as a TSV table. This is the case for:

• Mono mode, any number of requests, 1 clustering item (🆕 in 1.10)
• Multi mode, any number of requests, no clustering items → a TSV table is built with the number of occurrences for each request in each corpus.
• Multi mode, 1 request, 1 clustering item → a TSV table is built with the results of the clustering (with corpora on lines and values of the cluster key in rows).

The optionnal -config parameter (see here) can also be used.

TODO: The set of corpora is described in a JSON file and must be compiled before running grew count.

Example with Multi mode, several requests and no clustering

Each request is described in a separate file. With the two following 1-line files:

• ADJ_NOUN_pre.req 🔗

  pattern { A[upos=ADJ]; N[upos=NOUN]; N -[amod]-> A; A << N }
  

• ADJ_NOUN_post.req 🔗

  pattern { A[upos=ADJ]; N[upos=NOUN]; N -[amod]-> A; N << A }
  

and the Multi mode file en_fr_zh.json 🔗

{ "corpora": [
  { "id": "UD_English-PUD",
    "directory": "_build",
    "files": ["en_pud-ud-test.conllu"]
  },
  { "id": "UD_French-PUD",
    "directory": "_build",
    "files": ["fr_pud-ud-test.conllu"]
  },
  { "id": "UD_Chinese-PUD",
    "directory": "_build",
    "files": ["zh_pud-ud-test.conllu"]
  } ]
}

After compiling the corpora: grew compile -i en_fr_zh.json

The command grew count -request ADJ_NOUN_pre.req -request ADJ_NOUN_post.req -i en_fr_zh.json outputs the JSON data:

{
  "UD_French-PUD": { "ADJ_NOUN_pre.req": 423, "ADJ_NOUN_post.req": 935 },
  "UD_English-PUD": { "ADJ_NOUN_pre.req": 1114, "ADJ_NOUN_post.req": 12 },
  "UD_Chinese-PUD": { "ADJ_NOUN_pre.req": 364, "ADJ_NOUN_post.req": 0 }
}

And, with -tsv option: grew count -request ADJ_NOUN_pre.req -request ADJ_NOUN_post.req -i en_fr_zh.json -tsv

Corpus	ADJ_NOUN_pre	ADJ_NOUN_post
UD_English-PUD	1114	12
UD_French-PUD	423	935
UD_Chinese-PUD	364	0

which corresponds to the table:

Corpus	ADJ_NOUN	NOUN_ADJ
UD_English-PUD	1114	12
UD_French-PUD	423	935
UD_Chinese-PUD	364	0

We can then observe that in the annotations of the 3 corpora in use:

• in French, there is a weak preference for adjective position after the noun (68.9%)
• in English, there is a strong preference for adjective position before the noun (98.9%)
• in Chinese, there is a very strong preference for adjective position before the noun (100%)

Example with Multi mode, one request and a key clustering of the output

With the same data as in the previous example, the following command:

grew count -request ADJ_NOUN_pre.req -key N.Number -i en_fr_zh.json -tsv

produces the TSV file:

Corpus	__undefined__	Plur	Sing
UD_English-PUD	0	392	722
UD_French-PUD	0	178	245
UD_Chinese-PUD	364	0	0

which corresponds to the table:

Corpus	Plur	Sing	undefined
UD_English-PUD	392	722	0
UD_French-PUD	178	245	0
UD_Chinese-PUD	0	0	364

Example with Multi mode, one request and a whether clustering of the output

Using a whether clustering, with the request ADJ_NOUN.req 🔗

pattern { A[upos=ADJ]; N[upos=NOUN]; N -[amod]-> A; }

and the command: grew count -request ADJ_NOUN.req -whether "A << N" -i en_fr_zh.json -tsv

we obtain the TSV file:

Corpus	No	Yes
UD_English-PUD	12	1114
UD_French-PUD	935	423
UD_Chinese-PUD	0	364

which corresponds to the table:

Corpus	No	Yes
UD_English-PUD	12	1114
UD_French-PUD	935	423
UD_Chinese-PUD	0	364

Remarks

• Only one request is used in case of clustering.
• Request syntax can be learned here or with the online Grew-match tool, first with the tutorial and then with snippets given on the right of the text area.
• If some corpus is updated, it is necessary to run again the compilation step.
• Some requests may take a long time to be searched in corpora.
• ⚠️ In previous version (< 1.10), the TSV table also contains a column with the size of corpora (in number of sentences). This column is no longer available in version 1.10.

---

Compile

For the Grew-match backend (grew_match_back) or for the command grew count, it is required to first compile corpora. For these two usages, sets of corpora are described in a JSON file.

For compilation, the command is:

grew compile -i <corpora.json>

Note that this produces, for each corpus, a new file with the .marshal extension stored in the corpus directory. The .marshal file is computed only if the corpus has changed since the last compilation.

---

Clean

The commands below removes the marshal files produced by the grew compile command for the set of corpora described in the JSON file corpora.json.

grew clean -i <corpora.json>

---

Parameters

This section describes a few command line arguments that are shared by several commands.

-config

The config value can be: ud, sud, sequoia or basic. The default value is ud.

This parameter modifies how CoNNL-U and GRS files are interpreted. More precisely, it controls:

• How edge labels are parsed (for instance, taking @ extension into account in SUD). See here for a detailled description about this.
• How features are stored in CoNLL-U (columns FEATS or columns MISC). See here for details.

This parameter is used in the transform, grep and count modes.